Read FASTA formated Sequences

Usage

read.fasta(file, rm.dup = TRUE, to.upper = FALSE, to.dash=TRUE)

Arguments

file
input sequence file.
rm.dup
logical, if TRUE duplicate sequences (with the same names/ids) will be removed.
to.upper
logical, if TRUE residues are forced to uppercase.
to.dash
logical, if TRUE ‘.’ gap characters are converted to ‘-’ gap characters.

Description

Read aligned or un-aligned sequences from a FASTA format file.

Value

A list with two components:
ali
an alignment character matrix with a row per sequence and a column per equivalent aminoacid/nucleotide.

ids
sequence names as identifers.

call
the matched call.

References

Grant, B.J. et al. (2006) Bioinformatics 22, 2695--2696.

Note

For a description of FASTA format see: http://www.ncbi.nlm.nih.gov/BLAST/blastcgihelp.shtml. When reading alignment files, the dash ‘-’ is interpreted as the gap character.

Examples

# Read alignment aln <- read.fasta(system.file("examples/hivp_xray.fa",package="bio3d")) # Print alignment overview aln
1 . . . . . . 70 d1hhp__ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1nh0a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1nh0b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1s65a_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1s65b_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1kzka_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1kzkb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1sdua_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1sdub_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1s6ga_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1s6gb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1k1ta_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1k1tb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1sdta_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1sdtb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1sdva_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1sdvb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1s6sa_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1s6sb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1k1ua_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1k1ub_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1dazc_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1dazd_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1difa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1difb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4la_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1d4lb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1mtra_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGIIGGGFIKVRQYDQIPVEIXG d1mtrb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGIIGGGFIKVRQYDQIPVEIXG d1ffic_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ffid_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1k2ba_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1k2bb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ec0a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec0b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6la_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6lb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1d4ia_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4ib_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4ha_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4hb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6ja_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6jb_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1g35a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1g35b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebwa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebwb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6oa_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6ob_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1d4ja_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4jb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1proa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1prob_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1fejc_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1fejd_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1hvia_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvib_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1izha_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1izhb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6na_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6nb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1hvka_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvkb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hxwa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hxwb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ff0c_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1ff0d_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPIMIGGI--GGFIKVRQYDQIIIEIAG d1fg6c_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1fg6d_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1mt9a_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLE-MNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1mt9b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLE-MNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d2aida_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d2aidb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1mt7a_ PQITLWKRPLVTI-IGGQLKEAL-NTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1mt7b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1b6ka_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6kb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1hvja_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvjb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hpxa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hpxb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvla_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvlb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bwba_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bwbb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec3a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec3b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npaa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npab_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6ma_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6mb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1fffc_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1fffd_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ebza_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebzb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ajxa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ajxb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbsa_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEIXG d1qbsb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEIXG d1g2ka_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1g2kb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1kjha_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLE-MNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1kjhb_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYD-IPVEICG d1mesa_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1mesb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1dw6c_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1dw6d_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1d4ka_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1d4kb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1kjga_ PQITLWKRPLVTIRIGGQLK-ALLNTGADDTVLE-MNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1kjgb_ PQITLWKRPLVTI-IGGQLK-ALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1ajva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ajvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbra_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbrb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1mera_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1merb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1fg8c_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1fg8d_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1hvra_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvrb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hiva_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hivb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpya_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpyb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4ya_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1d4yb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1cpia_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1cpib_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1hiha_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hihb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a30a_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1a30b_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1hsga_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hsgb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1odxa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1odxb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1f7aa_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1f7ab_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1g6la1 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1g6la2 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hpva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hpvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npwa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npwb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1b6pa_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1b6pb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1qbua_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbub_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1fgcc_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1fgcd_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1kjfa_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLE--MLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1kjfb_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYD-IPVEICG d1kj7a_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1kj7b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1meua_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1meub_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvha_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvhb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec2a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec2b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hwra_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hwrb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hsha_ PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGI--GGFINTKEYKNVEIEVLN d1hshb_ PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGI--GGFINTKEYKNVEIEVLN d1hshc_ PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGI--GGFINTKEYKNVEIEVLN d1hshd_ PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGI--GGFINTKEYKNVEIEVLN d1odya_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGAWKPKMIGGI--GGFIKVRQYDQILIEICG d1odyb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGAWKPKAIGGI--GGFIKVRQYDQILIEICG d1mrwa_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1mrwb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1msma_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1msmb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1mrxa_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1mrxb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1bwaa_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bwab_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1htga_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1htgb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1npvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1msna_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1msnb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1ohra_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ohrb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1aida_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1aidb_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1lv1a1 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1lv1a2 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec1a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ec1b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1meta_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1metb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a94a_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWEPKMIGGI--GGFIKVRQYDQIIIEIAG d1a94b_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWEPKMIGGI--GGFIKVRQYDQIIIEIAG d1a94d_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWEPKMIGGI--GGFIKVRQYDQIIIEIAG d1a94e_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWEPKMIGGI--GGFIKVRQYDQIIIEIAG d1odwa_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1odwb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvsa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvsb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebkc_ -QITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ebkd_ PQITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ebke_ PQITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1ebkf_ PQITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d3tlha_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d4phva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d4phvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hvc__ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebya_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ebyb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a8ka_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1a8kb_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1a8kd_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1a8ke_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1mt8a_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1mt8b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLE-MNLPGKWKPKMIG----GGFIKVRQYDQIPVEICG d1bv9a_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bv9b_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbta_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1qbtb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hxba_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hxbb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1izia_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1izib_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1iiqa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1iiqb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1axaa_ PQITLWQRPLVTIKIGGQLKEALLDTGSDDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1axab_ PQITLWQRPLVTIKIGGQLKEALLDTGSDDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1dmpa_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEIXG d1dmpb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEIXG d1bv7a_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bv7b_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1lzqa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1lzqb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1m0ba_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1m0bb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hefe_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEENSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hosa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hosb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a9ma_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIHGI--GGFIKVRQYDQILIEICG d1a9mb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIHGI--GGFIKVRQYDQILIEICG d1sbga_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1sbgb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d4hvpa_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d4hvpb_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d2bpza_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpzb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hbva_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hbvb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1c70a_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1c70b_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d7hvpa_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d7hvpb_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1hpoa_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1hpob_ PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1hege_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEENSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1mtba_ PQITLWQRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1mtbb_ PQITLWQRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1htfa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1htfb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnoa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnob_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a8ga_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1a8gb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1c6za_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d1c6zb_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d1upj__ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1c6ya_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d1c6yb_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d8hvpa_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d8hvpb_ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1n49a_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1n49b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1n49c_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1n49d_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1hpsa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hpsb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnma_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnmb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d5hvpa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d5hvpb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1aaqa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1aaqb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d2bpwa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpwb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnna_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1gnnb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bdqa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSIVAGIELPGRWKPKMVGGI--GGFIKVRQYDQILIEICG d1bdqb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSIVAGIELPGRWKPKMVGGI--GGFIKVRQYDQILIEICG d1vika_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1vikb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d3aida_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d3aidb_ PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1fb7a_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIVGI--GGFIKVRQYDQILIEICG d2bpxa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bpxb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1c6xa_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d1c6xb_ PQITLWQRPVVTIKIGGQLMEALIDTGADDTVLEEMDLPGRWKPKIIGGI--GGFVKVRQYDQIPIEICG d1d4sa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1d4sb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2upja_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2upjb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1htea_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1hteb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1vija_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1vijb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bdra_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSVVAGIELPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bdrb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSVVAGIELPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bdla_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSIVAGIELPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bdlb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDSIVAGIELPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1k2ca_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1k2cb_ PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d1kj4a_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1kj4b_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1kj4c_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1kj4d_ PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1fqxa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1fqxb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d3hvp__ PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1muia_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1muib_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d3phv__ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d9hvpa_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d9hvpb_ PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bvga_ -QVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bvgb_ -QVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bvea_ -QVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1bveb_ PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2hvp__ ------QRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1k6c_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6c_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6p_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6p_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6t_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6t_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6v_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1k6v_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1rl8_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGAWKPKMIGGI--GGFIKVRQYDQILIEICG d1rl8_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGAWKPKMIGGI--GGFIKVRQYDQILIEICG d1rpi_a PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1rpi_b PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1rq9_a PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1rq9_b PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1sgu_a PQITLWQRPLVTIKIGGQLREALLDTGADDTIFEEISLPGRWKPKMIGGI--GGFVKVRQYDQIPIEICG d1sgu_b PQITLWQRPLVTIKIGGQLREALLDTGADDTIFEEISLPGRWKPKMIGGI--GGFVKVRQYDQIPIEICG d1sh9_a PQITLWQRPLVTIKIGGQLREALLDTGADDTIFEEISLPGRWKPKMIGGI--GGFVKVRQYDQIPIEICG d1sh9_b PQITLWQRPLVTIKIGGQLREALLDTGADDTIFEEISLPGRWKPKMIGGI--GGFVKVRQYDQIPIEICG d1sp5_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1sp5_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1t3r_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1t3r_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1t7i_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1t7i_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1t7j_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1t7j_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGI--GGFIKVRQYDQIPIEICG d1t7k_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1t7k_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1tcx_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTILEEMSLPGRWKPKMVGGI--GGFIKVRQYDQILIEICG d1tcx_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTILEEMSLPGRWKPKMVGGI--GGFIKVRQYDQILIEICG d1tsq_a PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1tsq_b PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1tsu_a PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1tsu_b PQITLWKRPLVTIRIGGQLKEALLNTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1tw7_a PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1tw7_b PQITLWQRPIVTIKIGGQLKEALLNTGADDTVLEEVNLPGRWKPKLIGGI--GGFVKVRQYDQVPIEICG d1u8g_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1u8g_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5v_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5v_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5w_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5w_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5x_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5x_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5y_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1w5y_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1wbk_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1wbk_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1wbm_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1wbm_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1xl2_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1xl2_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1xl5_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1xl5_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ytg_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1ytg_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1yth_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1yth_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEICG d1z1h_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1z1h_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1z1r_a PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1z1r_b PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEEMNLPGKWKPKMIGGI--GGFIKVRQYDQIPVEIXG d1zp8_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1zpa_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d1ztz_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d1ztz_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEICG d2a4f_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2a4f_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2aoc_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoc_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aod_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aod_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoe_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoe_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aof_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aof_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aog_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aog_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoh_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoh_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoi_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoi_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoj_a PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2aoj_b PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGI--GGFIKVRQYDQIIIEIAG d2bb9_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bb9_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bbb_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bbb_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bqv_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2bqv_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d2sam_a PQFHLWKRPVVTAHIEGQPVEVLLDTGADDSIVTGIELGPHYTPKIVGGI--GGFINTKEYKNVEIEVLG d7upj_a PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG d7upj_b PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGI--GGFIKVRQYDQILIEICG *^** * ** * ** * ^^ * ^ * ^ ***^ ^ * ^ ^*^ 1 . . . . . . 70 71 . . .101 d1hhp__ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1nh0a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1nh0b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1s65a_ HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d1s65b_ HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d1kzka_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kzkb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1sdua_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1sdub_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1s6ga_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1s6gb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1k1ta_ HKAIGTVLVGPTPSNIIGRNLLTQIGATLNF d1k1tb_ HKAIGTVLVGPTPSNIIGRNLLTQIGATLNF d1sdta_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1sdtb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1sdva_ HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d1sdvb_ HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d1s6sa_ HKAIGTVLVGPTPVNVIGRNLLTQIGATLNF d1s6sb_ HKAIGTVLVGPTPVNVIGRNLLTQIGATLNF d1k1ua_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1k1ub_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1dazc_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1dazd_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1difa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1difb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4la_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1d4lb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1mtra_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1mtrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1ffic_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ffid_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1k2ba_ HKAIGTVLVGPTPVNIIGRDLMTQIGATLNF d1k2bb_ HKAIGTVLVGPTPVNIIGRDLMTQIGATLNF d1ec0a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ec0b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6la_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6lb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1d4ia_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4ib_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4ha_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4hb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6ja_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6jb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1g35a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1g35b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ebwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ebwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6oa_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6ob_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1d4ja_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4jb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1proa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1prob_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1fejc_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1fejd_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1hvia_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvib_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1izha_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1izhb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6na_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6nb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1hvka_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvkb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hxwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hxwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ff0c_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ff0d_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1fg6c_ HKAIGTVLVGPTPVNIIGRDLLTQIGATLNF d1fg6d_ HKAIGTVLVGPTPVNIIGRDLLTQIGATLNF d1mt9a_ HKAIGTVLVGPTPANI-GRNLLTQIGCTLNF d1mt9b_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d2aida_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2aidb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mt7a_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1mt7b_ HKAIGTVLVGPTPANI-GRNLLTQIGCTLNF d1b6ka_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6kb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1hvja_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvjb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpxa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpxb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvla_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvlb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bwba_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1bwbb_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1ec3a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ec3b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npaa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npab_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6ma_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6mb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1fffc_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1fffd_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ebza_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ebzb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ajxa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ajxb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1qbsa_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1qbsb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1g2ka_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1g2kb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kjha_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kjhb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mesa_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1mesb_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1dw6c_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1dw6d_ HKAIGTVLVGPTPVNIIGRNLMTQIGATLNF d1d4ka_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1d4kb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1kjga_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kjgb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ajva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ajvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1qbra_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1qbrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1mera_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1merb_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1fg8c_ HKAIGTVLVGPTPVNIIGRDLLTQIGATLNF d1fg8d_ HKAIGTVLVGPTPVNIIGRDLLTQIGATLNF d1hvra_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hvrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hiva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hivb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpya_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpyb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4ya_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1d4yb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1cpia_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1cpib_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1hiha_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hihb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a30a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a30b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hsga_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hsgb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1odxa_ HKTIGTVLVGPTPANIIGRNLLTQIGCTLNF d1odxb_ HKTIGTVLVGPTPANIIGRNLLTQIGCTLNF d1f7aa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1f7ab_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1g6la1 HKAIGTVLVGPTPVNIIGRNLLTQIGMTLNF d1g6la2 HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1b6pa_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1b6pb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1qbua_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1qbub_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1fgcc_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1fgcd_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1kjfa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kjfb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kj7a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kj7b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1meua_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1meub_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1hvha_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hvhb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ec2a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ec2b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hwra_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hwrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hsha_ KKVRATIMTGDTPINIFGRNILTALGMSLNL d1hshb_ KKVRATIMTGDTPINIFGRNILTALGMSLNL d1hshc_ KKVRATIMTGDTPINIFGRNILTALGMSLNL d1hshd_ KKVRATIMTGDTPINIFGRNILTALGMSLNL d1odya_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1odyb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mrwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mrwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1msma_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1msmb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mrxa_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1mrxb_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1bwaa_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1bwab_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1htga_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1htgb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1npvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1msna_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1msnb_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1ohra_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ohrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1aida_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1aidb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1lv1a1 HKAIGTVLVGPTPVNIIGRNLLTQIGMTLNF d1lv1a2 HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ec1a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ec1b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1meta_ HKAIGTVLVGPTPFNIIGRNLLTQIGCTLNF d1metb_ HKAIGTVLVGPTPFNIIGRNLLTQIGCTLNF d1a94a_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1a94b_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1a94d_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1a94e_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1odwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1odwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvsa_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1hvsb_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1ebkc_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ebkd_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ebke_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1ebkf_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d3tlha_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d4phva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d4phvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hvc__ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ebya_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ebyb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8ka_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8kb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8kd_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8ke_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mt8a_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1mt8b_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1bv9a_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1bv9b_ HKAIGTVLVGPTPVNVIGRNLLTQIGCTLNF d1qbta_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1qbtb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1hxba_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hxbb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1izia_ HKVIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1izib_ HKVIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1iiqa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1iiqb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1axaa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1axab_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1dmpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1dmpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1bv7a_ HKAIGTVLVGPTPFNIIGRNLLTQIGCTLNF d1bv7b_ HKAIGTVLVGPTPFNIIGRNLLTQIGCTLNF d1lzqa_ HKVIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1lzqb_ HKVIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1m0ba_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1m0bb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hefe_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hosa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hosb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a9ma_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a9mb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1sbga_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1sbgb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d4hvpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d4hvpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d2bpza_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpzb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hbva_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hbvb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1c70a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1c70b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d7hvpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d7hvpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1hpoa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpob_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hege_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mtba_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1mtbb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1htfa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1htfb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1gnoa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1gnob_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8ga_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1a8gb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1c6za_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d1c6zb_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d1upj__ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1c6ya_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d1c6yb_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d8hvpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d8hvpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1n49a_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1n49b_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1n49c_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1n49d_ HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1hpsa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hpsb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1gnma_ HKAIGTVLVGPTPDNIIGRNLLTQIGCTLNF d1gnmb_ HKAIGTVLVGPTPDNIIGRNLLTQIGCTLNF d5hvpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d5hvpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1aaqa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1aaqb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpwa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpwb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1gnna_ HKAIGTVLVGPTPNNIIGRNLLTQIGCTLNF d1gnnb_ HKAIGTVLVGPTPNNIIGRNLLTQIGCTLNF d1bdqa_ HKAIGTVLVGPTPINIIGRNLLTQIGCTLNF d1bdqb_ HKAIGTVLVGPTPINIIGRNLLTQIGCTLNF d1vika_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1vikb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d3aida_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d3aidb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1fb7a_ HKAIGTVLVGPTPVNIIGRNLMTQIGCTLNF d2bpxa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bpxb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1c6xa_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d1c6xb_ HKVIGTVLVGPTPTNIIGRNLLTQIGCTLNF d1d4sa_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d1d4sb_ HKAIGTVLVGPTPFNVIGRNLLTQIGCTLNF d2upja_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2upjb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1htea_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1hteb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1vija_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1vijb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bdra_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bdrb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bdla_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bdlb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1k2ca_ HKAIGTVLVGPTPSNIIGRNLLTQIGATLNF d1k2cb_ HKAIGTVLVGPTPSNIIGRNLLTQIGATLNF d1kj4a_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kj4b_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kj4c_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1kj4d_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1fqxa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1fqxb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d3hvp__ HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1muia_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1muib_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d3phv__ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d9hvpa_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d9hvpb_ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1bvga_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1bvgb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1bvea_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d1bveb_ HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2hvp__ HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1k6c_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6c_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6p_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6p_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6t_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6t_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6v_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1k6v_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1rl8_a HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1rl8_b HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1rpi_a HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1rpi_b HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1rq9_a HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1rq9_b HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1sgu_a HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1sgu_b HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1sh9_a HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1sh9_b HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1sp5_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1sp5_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1t3r_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1t3r_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1t7i_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1t7i_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1t7j_a HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1t7j_b HKAIGTVLVGPTPTNVIGRNLLTQIGCTLNF d1t7k_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1t7k_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1tcx_a HKAIGTVLVGPTPINIIGRNLLTQIGCTLNF d1tcx_b HKAIGTVLVGPTPINIIGRNLLTQIGCTLNF d1tsq_a HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1tsq_b HKAIGTVLVGPTPANIIGRNLLTQIGCTLNF d1tsu_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1tsu_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1tw7_a HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1tw7_b HKVIGTVLVGPTPANVIGRNLMTQIGCTLNF d1u8g_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1u8g_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5v_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5v_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5w_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5w_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5x_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5x_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5y_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1w5y_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1wbk_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1wbk_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1wbm_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1wbm_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1xl2_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1xl2_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1xl5_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1xl5_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ytg_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ytg_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1yth_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1yth_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1z1h_a HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1z1h_b HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1z1r_a HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1z1r_b HKAIGTVLVGPTPVNIIGRNLLTQIGXTLNF d1zp8_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1zpa_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ztz_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d1ztz_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2a4f_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2a4f_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2aoc_a HKAIGTVLVGPTPVNVIGRNLLTQIGATLNF d2aoc_b HKAIGTVLVGPTPVNVIGRNLLTQIGATLNF d2aod_a HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2aod_b HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2aoe_a HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aoe_b HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aof_a HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aof_b HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aog_a HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aog_b HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aoh_a HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aoh_b HKAIGTVLVGPTPANIIGRNLLTQIGATLNF d2aoi_a HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2aoi_b HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2aoj_a HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2aoj_b HKAIGTVLVGPTPVNIIGRNLLTQIGATLNF d2bb9_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bb9_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bbb_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bbb_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bqv_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2bqv_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d2sam_a KRIKGTIMTGDTPINIFGRNLLTALGMSLNF d7upj_a HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF d7upj_b HKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF ^^ ^*^^ * ** *^ ** ^^* ^* ^** 71 . . .101 Call: read.fasta(file = system.file("examples/hivp_xray.fa", package = "bio3d")) Class: fasta Alignment dimensions: 425 sequence rows; 101 position columns (84 non-gap, 17 gap) + attr: id, ali, call
# Sequence names/ids head( aln$id )
[1] "d1hhp__" "d1nh0a_" "d1nh0b_" "d1s65a_" "d1s65b_" "d1kzka_"
# Alignment positions 335 to 339 head( aln$ali[,33:39] )
[,1] [,2] [,3] [,4] [,5] [,6] [,7] d1hhp__ "L" "E" "E" "M" "S" "L" "P" d1nh0a_ "L" "E" "E" "M" "S" "L" "P" d1nh0b_ "L" "E" "E" "M" "S" "L" "P" d1s65a_ "I" "E" "E" "M" "S" "L" "P" d1s65b_ "I" "E" "E" "M" "S" "L" "P" d1kzka_ "L" "E" "E" "M" "N" "L" "P"
# Sequence d2a4f_b aa123( aln$ali["d2a4f_b",] )
[1] "PRO" "GLN" "ILE" "THR" "LEU" "TRP" "GLN" "ARG" "PRO" "LEU" "VAL" "THR" [13] "ILE" "LYS" "ILE" "GLY" "GLY" "GLN" "LEU" "LYS" "GLU" "ALA" "LEU" "LEU" [25] "ASP" "THR" "GLY" "ALA" "ASP" "ASP" "THR" "VAL" "LEU" "GLU" "GLU" "MET" [37] "SER" "LEU" "PRO" "GLY" "ARG" "TRP" "LYS" "PRO" "LYS" "MET" "ILE" "GLY" [49] "GLY" "ILE" "---" "---" "GLY" "GLY" "PHE" "ILE" "LYS" "VAL" "ARG" "GLN" [61] "TYR" "ASP" "GLN" "ILE" "LEU" "ILE" "GLU" "ILE" "CYS" "GLY" "HIS" "LYS" [73] "ALA" "ILE" "GLY" "THR" "VAL" "LEU" "VAL" "GLY" "PRO" "THR" "PRO" "VAL" [85] "ASN" "ILE" "ILE" "GLY" "ARG" "ASN" "LEU" "LEU" "THR" "GLN" "ILE" "GLY" [97] "CYS" "THR" "LEU" "ASN" "PHE"
# Write out positions 33 to 45 only #aln$ali=aln$ali[,30:45] #write.fasta(aln, file="eg2.fa")

See also

read.fasta.pdb

Author

Barry Grant